STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OXB_3000Hypothetical protein. (113 aa)    
Predicted Functional Partners:
OXB_2999
Hypothetical protein.
       0.773
OXB_3001
DNA topoisomerase domain protein.
       0.746
OXB_3002
ATP synthase epsilon chain 2.
       0.746
OXB_2998
Hypothetical protein.
       0.664
OXB_3003
Hypothetical protein.
 
     0.624
OXB_3004
Hypothetical protein.
 
     0.591
OXB_2997
Hypothetical protein.
       0.563
OXB_2996
Hypothetical protein.
       0.479
OXB_3009
Hypothetical protein.
  
    0.453
OXB_3005
Hypothetical protein.
       0.452
Your Current Organism:
Bacillus sp. OxB1
NCBI taxonomy Id: 98228
Other names: B. sp. OxB-1, Bacillus sp. OxB-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.