STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OXB_3003Hypothetical protein. (236 aa)    
Predicted Functional Partners:
OXB_3004
Hypothetical protein.
 
     0.940
OXB_3005
Hypothetical protein.
       0.648
OXB_3009
Hypothetical protein.
       0.636
OXB_3008
Hypothetical protein.
       0.628
OXB_3000
Hypothetical protein.
 
     0.622
OXB_3006
Hypothetical protein.
       0.619
OXB_3007
Hypothetical protein.
       0.619
OXB_3001
DNA topoisomerase domain protein.
       0.547
OXB_3002
ATP synthase epsilon chain 2.
       0.547
OXB_2999
Hypothetical protein.
       0.529
Your Current Organism:
Bacillus sp. OxB1
NCBI taxonomy Id: 98228
Other names: B. sp. OxB-1, Bacillus sp. OxB-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.