Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OXB_3166Hypothetical protein. (559 aa)    
Predicted Functional Partners:
OXB_2201
Hypothetical protein.
  
    0.777
OXB_1626
Polysaccharide pyruvyl transferase.
  
   
 0.771
OXB_1623
N-acetylmuramoyl-L-alanine amidase.
  
   
 0.767
OXB_2392
Hypothetical protein.
  
     0.758
OXB_1593
Hypothetical protein.
 
   
 0.747
OXB_1649
Hypothetical protein.
  
     0.571
OXB_1592
Hypothetical protein.
  
     0.530
OXB_1651
UDP-phosphate n-acetylglucosaminyl 1-phosphate transferase.
  
   
 0.485
OXB_1738
Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
 
    0.483
OXB_3167
Short-chain dehydrogenase/reductase SDR.
       0.473
Your Current Organism:
Bacillus sp. OxB1
NCBI taxonomy Id: 98228
Other names: B. sp. OxB-1, Bacillus sp. OxB-1
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