STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OXB_3206Transcriptional regulator. (195 aa)    
Predicted Functional Partners:
OXB_3205
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
  
 0.809
OXB_3204
Electron transfer flavoprotein subunit beta.
 
  
 0.800
OXB_3220
Transcriptional regulator.
  
     0.712
OXB_3207
AMP-dependent synthetase and ligase.
 
    0.659
OXB_3203
Electron transfer flavoprotein subunit alpha.
 
  
 0.627
OXB_0082
3-hydroxyacyl-CoA dehydrogenase.
 
  
 0.555
OXB_1329
TetR/AcrR family transcriptional regulator.
  
     0.522
OXB_1510
TetR family transcriptional regulator.
  
     0.502
OXB_3208
Membrane protein.
 
     0.458
pth
peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.
  
    0.441
Your Current Organism:
Bacillus sp. OxB1
NCBI taxonomy Id: 98228
Other names: B. sp. OxB-1, Bacillus sp. OxB-1
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.