Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
OXB_3208Membrane protein. (137 aa)    
Predicted Functional Partners:
OXB_3210
DNA polymerase IV.
  
  
 0.840
OXB_3211
Colicin V production protein.
     
 0.815
OXB_0634
Anti-sigma-w factor rsiw.
  
     0.772
mutS2
Muts2 protein; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.
  
  
 0.766
OXB_2324
Protease prsw; Involved in the degradation of specific anti-sigma factors. Belongs to the protease PrsW family.
  
     0.695
OXB_1246
Phage shock protein.
 
     0.688
OXB_2339
Heptaprenyl diphosphate synthase component 1.
  
     0.664
zapA
Cell division protein zapa; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division.
     
 0.658
OXB_2462
Cytochrome C biogenesis protein.
  
     0.630
OXB_3207
AMP-dependent synthetase and ligase.
       0.608
Your Current Organism:
Bacillus sp. OxB1
NCBI taxonomy Id: 98228
Other names: B. sp. OxB-1, Bacillus sp. OxB-1
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