Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OXB_34523,4-dihydroxyphenylacetate 2,3-dioxygenase. (328 aa)    
Predicted Functional Partners:
OXB_3454
4-hydroxyphenylacetate 3-monooxygenase oxygenase.
 
   
 0.888
OXB_3440
5-carboxymethyl-2-hydroxymuconate isomerase.
 
   
 0.812
OXB_2504
2-hydroxypenta-2,4-dienoate hydratase.
 
  
 0.711
OXB_2505
2-oxopent-4-enoate hydratase.
 
  
 0.709
OXB_3446
4-hydroxyphenylacetate 3-hydroxylase.
 
   
 0.703
OXB_3453
Transcriptional regulator, lysr family; Belongs to the LysR transcriptional regulatory family.
 
   
 0.703
OXB_2499
4-hydroxyphenylacetate 3-hydroxylase.
 
   
 0.701
OXB_2686
4-hydroxyphenylacetate 3-hydroxylase.
 
   
 0.677
OXB_3450
Transcriptional regulator, gntr family.
 
   
 0.635
OXB_3436
5-carboxymethyl-2-hydroxymuconate semialdehyde; Belongs to the aldehyde dehydrogenase family.
 
 
 0.597
Your Current Organism:
Bacillus sp. OxB1
NCBI taxonomy Id: 98228
Other names: B. sp. OxB-1, Bacillus sp. OxB-1
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.