STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSDC2Cold shock domain containing C2. (153 aa)    
Predicted Functional Partners:
PJA2
Praja ring finger ubiquitin ligase 2.
      
 0.727
RBM23
RNA binding motif protein 23.
    
 
 0.680
MBOAT2
Membrane bound O-acyltransferase domain containing 2; Belongs to the membrane-bound acyltransferase family.
      
 0.670
LETMD1
LETM1 domain-containing protein 1 isoform a.
      
 0.650
DNAJC10
DnaJ heat shock protein family (Hsp40) member C10.
   
 
 0.648
SNX4
Sorting nexin 4.
   
  
 0.634
MPPED2
Metallophosphoesterase domain containing 2.
      
 0.610
DACT1
Dishevelled binding antagonist of beta catenin 1.
      
 0.607
DDX28
DEAD-box helicase 28.
  
 
 0.594
CIP2A
Cell proliferation regulating inhibitor of protein phosphatase 2A.
      
 0.590
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.