STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APOF-2Ovarian and testicular apolipoprotein N. (254 aa)    
Predicted Functional Partners:
OR10P1
Olfactory receptor.
      
 0.722
R3HDM1
R3H domain-containing protein 1 isoform X1.
      
 0.628
SLC39A5
Solute carrier family 39 member 5.
      
 0.608
APOH
Beta-2-glycoprotein 1.
   
  
 0.575
RAD9A
Cell cycle checkpoint control protein; Belongs to the rad9 family.
      
 0.555
CDHR4
Cadherin related family member 4.
      
 0.548
TFIP11
Tuftelin-interacting protein 11; Involved in pre-mRNA splicing, specifically in spliceosome disassembly during late-stage splicing events. Intron turnover seems to proceed through reactions in two lariat-intron associated complexes termed Intron Large (IL) and Intron Small (IS). In cooperation with DHX15 seems to mediate the transition of the U2, U5 and U6 snRNP- containing IL complex to the snRNP-free IS complex leading to efficient debranching and turnover of excised introns. May play a role in the differentiation of ameloblasts and odontoblasts or in the forming of the enamel extrac [...]
      
 0.546
MVD
Mevalonate diphosphate decarboxylase.
      
 0.545
XKR4
XK-related protein.
   
  
 0.533
EXOC3
Exocyst complex component 3.
      
 0.531
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.