STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RERGRAS like estrogen regulated growth inhibitor. (180 aa)    
Predicted Functional Partners:
TRA2A
Transformer 2 alpha homolog.
   
 
 0.780
ZFAT
Zinc finger and AT-hook domain containing.
    
 
 0.710
SPNS3
Sphingolipid transporter 3 (putative).
    
 
 0.701
MED7
Mediator of RNA polymerase II transcription subunit 7; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors (By similarity).
      
 0.654
METTL6
Methyltransferase-like protein; Belongs to the methyltransferase superfamily. METL family.
      
 0.648
ITSN2
Intersectin 2.
   
 
 0.640
PITPNM3
PITPNM family member 3.
    
 
 0.640
ARHGDIB
Uncharacterized protein.
   
 
 0.617
ITSN1
Intersectin 1.
    
 
 0.604
RSU1
Ras suppressor protein 1.
    
 
 0.589
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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