STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POC1BPOC1 centriolar protein B. (478 aa)    
Predicted Functional Partners:
POC5
POC5 centriolar protein.
    
 
 0.959
CEP135
Centrosomal protein of 135 kDa.
    
 
 0.861
SASS6
Spindle assembly abnormal protein 6 homolog isoform X1.
      
 0.821
CETN1
Centrin 1.
    
 
 0.802
TUBD1
Tubulin delta 1; Belongs to the tubulin family.
   
 
 0.785
TMTC3
Transmembrane O-mannosyltransferase targeting cadherins 3.
   
 
 0.784
CEP63
Centrosomal protein 63.
      
 0.781
TUBE1
Tubulin epsilon 1; Belongs to the tubulin family.
   
 
 0.765
SPICE1
Uncharacterized protein.
      
 0.701
CEP120
Centrosomal protein 120.
   
 
 0.699
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.