Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OTOGLOtogelin like. (2353 aa)    
Predicted Functional Partners:
C1orf105
Chromosome 1 open reading frame 105.
      
 0.870
GP1BA
Platelet glycoprotein Ib alpha polypeptide.
   
 0.849
ADAMTS13
ADAM metallopeptidase with thrombospondin type 1 motif 13.
    
  0.782
OTOP1
Otopetrin 1.
      
 0.774
GP9
Glycoprotein IX platelet.
   
 0.751
GP1BB
Platelet glycoprotein Ib beta chain.
    
 0.738
COCH
Cochlin isoform X2.
      
 0.725
NTN4
Netrin 4.
   
  
 0.712
HS2ST1
Uncharacterized protein.
   
  
 0.711
CCDC30
Uncharacterized protein.
    
 
 0.703
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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