Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
WRNIP1WRN helicase interacting protein 1. (638 aa)    
Predicted Functional Partners:
WRN
WRN RecQ like helicase.
  
 
 0.889
I3LND9_PIG
Uncharacterized protein.
    
 
 0.856
RAD18
RAD18 E3 ubiquitin protein ligase.
    
 
 0.843
PCNA
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
    
 
 0.818
BLM
BLM RecQ like helicase.
  
 
 0.800
UBASH3B
Ubiquitin associated and SH3 domain containing B.
   
 
 0.734
POLD2
DNA polymerase delta 2, accessory subunit.
    
 
 0.708
DNA2
DNA replication helicase/nuclease 2.
   
 
 0.680
MCM2
DNA helicase; Belongs to the MCM family.
    
 
 0.662
POLD1
DNA polymerase.
    
 
 0.661
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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