Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RIPOR2PL48 domain-containing protein. (1063 aa)    
Predicted Functional Partners:
CANT1
Calcium activated nucleotidase 1.
      
 0.787
MRPS6
Uncharacterized protein.
      
 0.721
MOSPD1
Motile sperm domain containing 1.
      
 0.707
GPR157
G protein-coupled receptor 157.
   
 
 0.707
LOC100156231
Ubiquitin_3 domain-containing protein.
   
 
 0.699
RIMS2
Regulating synaptic membrane exocytosis 2.
     
 0.687
LOC100515166
IF rod domain-containing protein; Belongs to the intermediate filament family.
   
 
 0.648
RHOA
Transforming protein RhoA isoform 1.
   
 
 0.632
RSL24D1
Ribosomal L24 domain containing 1.
      
 0.599
SYNJ2BP
Synaptojanin 2 binding protein.
    
 0.595
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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