STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F2Z581_PIGHistone domain-containing protein; Belongs to the histone H2B family. (85 aa)    
Predicted Functional Partners:
GLYR1
Glyoxylate reductase 1 homolog.
    
   0.598
A0A287A1S9_PIG
Histone H2A; Belongs to the histone H2A family.
  
 
 0.563
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 
 0.553
LOC100154071
Histone H2A; Belongs to the histone H2A family.
  
 
 0.548
H2AC12
Histone H2A type 1-H.
  
 
 0.548
H2AC1
Histone H2A; Belongs to the histone H2A family.
  
 
 0.548
H2AC20
Histone H2A; Belongs to the histone H2A family.
  
 
 0.546
LOC100158121
Histone H2A; Belongs to the histone H2A family.
  
 
 0.545
H2AJ
Histone H2A; Belongs to the histone H2A family.
  
 
 0.545
LOC100158121-2
Histone H2A type 1.
  
 
 0.545
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.