Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NKAPLNFKB activating protein like. (405 aa)    
Predicted Functional Partners:
NOS1AP
PID domain-containing protein.
    
   0.757
CIR1
Corepressor interacting with RBPJ 1.
   
 
 0.748
PRPF3
U4/U6 small nuclear ribonucleoprotein Prp3 isoform 1.
   
 
 0.729
PRPF40A
Pre-mRNA processing factor 40 homolog A.
   
 
 0.698
DHX8
DEAH-box helicase 8.
   
 
 0.674
DDX41
DEAD-box helicase 41.
    
 
 0.660
RBMX2
RRM domain-containing protein.
   
   0.621
RP9
RP9 pre-mRNA splicing factor.
   
 
 0.608
SDE2
SDE2 telomere maintenance homolog.
    
 
 0.602
BUB3
BUB3 mitotic checkpoint protein.
   
   0.579
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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