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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGBD1PiggyBac transposable element-derived protein 1 isoform X1. (807 aa)    
Predicted Functional Partners:
PGBD5
PiggyBac transposable element-derived protein 5.
    
 
 0.945
ZNF862
Zinc finger protein 862.
  
   
 0.663
ZBED1
Zinc finger BED domain-containing protein 1.
    
 
 0.649
POGK
Pogo transposable element with KRAB domain isoform X1.
      
 0.646
GRID2
Glutamate ionotropic receptor delta type subunit 2; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.
      
 0.604
NYNRIN
NYN domain and retroviral integrase containing.
    
 
 0.602
GIN1
Gypsy retrotransposon integrase-like protein 1 isoform 1.
    
 
 0.588
SCAND1
SCAN domain-containing protein 1 isoform 1.
    
  
0.582
ZNF446
Zinc finger protein 446.
    
  
0.578
THAP9
THAP domain containing 9.
      
 0.572
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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