Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZBED9Zinc finger BED-type containing 9. (1322 aa)    
Predicted Functional Partners:
ZSCAN20
Zinc finger and SCAN domain-containing protein 20.
    
  0.843
ZSCAN29
Zinc finger and SCAN domain containing 29.
    
  0.770
FANCM
FA complementation group M.
    
 0.683
TONSL
Tonsoku like, DNA repair protein.
    
  0.574
TRIM69
Tripartite motif containing 69.
   
 
 0.556
TSGA10IP
Testis specific 10 interacting protein.
      
 0.542
ANGPTL7
Angiopoietin-related protein 7.
    
 0.535
THAP3
THAP domain containing 3.
      
 0.530
RPA1
Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage.
    
 0.447
MEIOB
Meiosis specific with OB-fold.
    
 0.447
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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