close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIM31Uncharacterized protein. (569 aa)    
Predicted Functional Partners:
MAVS
Mitochondrial antiviral signaling protein.
   
 
 0.790
TRIM23
E3 ubiquitin-protein ligase TRIM23 isoform alpha.
    
 
 0.646
TRIM56
Tripartite motif containing 56.
    
 
 0.611
MAGEF1
MAGE family member F1.
   
 
 0.605
TRIM44
Tripartite motif containing 44.
    
 
 0.605
ABHD16A
Abhydrolase domain containing 16A.
    
 
 0.592
LY6G5C
Lymphocyte antigen 6 family member G5C.
      
 0.586
OTUB2
OTU deubiquitinase, ubiquitin aldehyde binding 2.
    
 
 0.548
CSNK2B
Casein kinase II subunit beta; Participates in Wnt signaling. Plays a complex role in regulating the basal catalytic activity of the alpha subunit (By similarity).
   
 
 0.544
RNF125
Ring finger protein 125.
    
 
 0.542
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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