Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZBTB12Zinc finger and BTB domain-containing protein 12. (459 aa)    
Predicted Functional Partners:
PRRT1
Uncharacterized protein.
  
 
 0.810
L3MBTL3
Lethal(3)malignant brain tumor-like protein 3 isoform X2.
    
 
 0.766
SKIV2L
Ski2 like RNA helicase.
    
 
 0.717
MSL3
MSL complex subunit 3.
    
 
 0.711
CBX8
Uncharacterized protein.
    
 
 0.564
DDAH1
Dimethylarginine dimethylaminohydrolase 1.
    
 0.563
GTF3C3
General transcription factor 3C polypeptide 3 isoform 1.
   
 
 0.540
PPT2
Palmitoyl-protein thioesterase 2.
      
 0.539
OR10J4
Olfactory receptor family 10 subfamily J member 4 (gene/pseudogene).
      
 0.532
LMBR1L
Limb development membrane protein 1 like; Belongs to the LIMR family.
      
 0.504
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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