Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLA-DMBMajor histocompatibility complex, class II, DM beta. (272 aa)    
Predicted Functional Partners:
SLA-DMA
Ig-like domain-containing protein; Belongs to the MHC class II family.
 
 
 0.999
HLA-DRA
Major histocompatibility complex, class II, DR alpha; Belongs to the MHC class II family.
   
0.998
CD74
Thyroglobulin type-1 domain-containing protein.
   
 0.982
SLA-DQA1
SLA class II histocompatibility antigen, DQ haplotype D alpha chain.
   
0.962
HLA-DOB
HLA class II histocompatibility antigen, DO beta chain.
   
0.954
SLA-DOA
Ig-like domain-containing protein; Belongs to the MHC class II family.
   
0.933
CD4
CD4 molecule.
   
 0.907
CD247
T-cell surface glycoprotein CD3 zeta chain; Part of the TCR-CD3 complex present on T-lymphocyte cell surface that plays an essential role in adaptive immune response. When antigen presenting cells (APCs) activate T-cell receptor (TCR), TCR- mediated signals are transmitted across the cell membrane by the CD3 chains CD3D, CD3E, CD3G and CD3Z. All CD3 chains contain immunoreceptor tyrosine-based activation motifs (ITAMs) in their cytoplasmic domain. Upon TCR engagement, these motifs become phosphorylated by Src family protein tyrosine kinases LCK and FYN, resulting in the activation of d [...]
     
  0.890
SLA-DQB1
SLA class II histocompatibility antigen, DQ haplotype C beta chain.
   
 
0.871
SLA-DRB1
Ig-like domain-containing protein.
   
0.868
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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