SLA-DOA protein (Sus scrofa) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

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[Homology]

Score

SLA-DOA

Ig-like domain-containing protein; Belongs to the MHC class II family. (360 aa)

Predicted Functional Partners:

HLA-DOB

0.948

SLA-DMB

0.933

TRAV16

0.909

A0A5G2R5H2_PIG

0.909

LOC110261595

0.909

SLA-DMA

0.859

HLA-DRA

0.789

SLA-DRB1

0.771

CD74

0.759

SLA-DQB1

0.729

Your Current Organism:

Sus scrofa

NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A5G2R5H2_PIG	HLA-DOB	ENSSSCP00000069420	ENSSSCP00000001577	Uncharacterized protein.	HLA class II histocompatibility antigen, DO beta chain.	0.919
A0A5G2R5H2_PIG	HLA-DRA	ENSSSCP00000069420	ENSSSCP00000001567	Uncharacterized protein.	Major histocompatibility complex, class II, DR alpha; Belongs to the MHC class II family.	0.926
A0A5G2R5H2_PIG	LOC110261595	ENSSSCP00000069420	ENSSSCP00000072615	Uncharacterized protein.	Ig-like domain-containing protein.	0.900
A0A5G2R5H2_PIG	SLA-DMA	ENSSSCP00000069420	ENSSSCP00000030928	Uncharacterized protein.	Ig-like domain-containing protein; Belongs to the MHC class II family.	0.900
A0A5G2R5H2_PIG	SLA-DMB	ENSSSCP00000069420	ENSSSCP00000001591	Uncharacterized protein.	Major histocompatibility complex, class II, DM beta.	0.909
A0A5G2R5H2_PIG	SLA-DOA	ENSSSCP00000069420	ENSSSCP00000001596	Uncharacterized protein.	Ig-like domain-containing protein; Belongs to the MHC class II family.	0.909
A0A5G2R5H2_PIG	SLA-DQB1	ENSSSCP00000069420	ENSSSCP00000062346	Uncharacterized protein.	SLA class II histocompatibility antigen, DQ haplotype C beta chain.	0.900
A0A5G2R5H2_PIG	TRAV16	ENSSSCP00000069420	ENSSSCP00000055651	Uncharacterized protein.	T cell receptor alpha variable 16.	0.900
CD74	HLA-DOB	ENSSSCP00000050395	ENSSSCP00000001577	Thyroglobulin type-1 domain-containing protein.	HLA class II histocompatibility antigen, DO beta chain.	0.893
CD74	HLA-DRA	ENSSSCP00000050395	ENSSSCP00000001567	Thyroglobulin type-1 domain-containing protein.	Major histocompatibility complex, class II, DR alpha; Belongs to the MHC class II family.	0.990
CD74	SLA-DMA	ENSSSCP00000050395	ENSSSCP00000030928	Thyroglobulin type-1 domain-containing protein.	Ig-like domain-containing protein; Belongs to the MHC class II family.	0.877
CD74	SLA-DMB	ENSSSCP00000050395	ENSSSCP00000001591	Thyroglobulin type-1 domain-containing protein.	Major histocompatibility complex, class II, DM beta.	0.825
CD74	SLA-DOA	ENSSSCP00000050395	ENSSSCP00000001596	Thyroglobulin type-1 domain-containing protein.	Ig-like domain-containing protein; Belongs to the MHC class II family.	0.759
CD74	SLA-DQB1	ENSSSCP00000050395	ENSSSCP00000062346	Thyroglobulin type-1 domain-containing protein.	SLA class II histocompatibility antigen, DQ haplotype C beta chain.	0.692
CD74	SLA-DRB1	ENSSSCP00000050395	ENSSSCP00000055121	Thyroglobulin type-1 domain-containing protein.	Ig-like domain-containing protein.	0.900
HLA-DOB	A0A5G2R5H2_PIG	ENSSSCP00000001577	ENSSSCP00000069420	HLA class II histocompatibility antigen, DO beta chain.	Uncharacterized protein.	0.919
HLA-DOB	CD74	ENSSSCP00000001577	ENSSSCP00000050395	HLA class II histocompatibility antigen, DO beta chain.	Thyroglobulin type-1 domain-containing protein.	0.893
HLA-DOB	HLA-DRA	ENSSSCP00000001577	ENSSSCP00000001567	HLA class II histocompatibility antigen, DO beta chain.	Major histocompatibility complex, class II, DR alpha; Belongs to the MHC class II family.	0.926
HLA-DOB	LOC110261595	ENSSSCP00000001577	ENSSSCP00000072615	HLA class II histocompatibility antigen, DO beta chain.	Ig-like domain-containing protein.	0.925
HLA-DOB	SLA-DMA	ENSSSCP00000001577	ENSSSCP00000030928	HLA class II histocompatibility antigen, DO beta chain.	Ig-like domain-containing protein; Belongs to the MHC class II family.	0.970