Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
TAF11Transcription initiation factor TFIID subunit 11 isoform 1. (211 aa)    
Predicted Functional Partners:
TAF5
Transcription initiation factor TFIID subunit 5 isoform 1.
    
 0.996
TAF10
Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.
   
 0.996
TAF2
TATA-box binding protein associated factor 2.
    
 0.996
TAF12
Transcription initiation factor TFIID subunit 12 isoform X1.
   
 0.996
TAF8
TATA-box binding protein associated factor 8.
   
 0.996
TAF6
TATA-box binding protein associated factor 6.
    
 0.996
TAF3
TATA-box binding protein associated factor 3.
   
 0.995
TAF4
TATA-box binding protein associated factor 4.
    
 0.995
TAF4B
TATA-box binding protein associated factor 4b.
    
 0.994
TAF1
Transcription initiation factor TFIID subunit.
    
 0.986
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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