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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARMC12Armadillo repeat containing 12. (363 aa)    
Predicted Functional Partners:
TBC1D21
TBC1 domain family member 21.
   
  
 0.859
TRIM7
Tripartite motif containing 7.
    
 
 0.854
KLHL40
Kelch like family member 40.
      
 0.787
DMRTA1
Doublesex-and mab-3-related transcription factor A1.
      
 0.689
CCDC38
Coiled-coil domain containing 38.
      
 0.670
ARMC1
Armadillo repeat-containing protein 1.
      
 0.652
CDH16
Cadherin 16.
    
 
 0.557
ADAD1
Adenosine deaminase domain containing 1.
      
 0.554
SLC38A5
Sodium-coupled neutral amino acid transporter 5 isoform X5.
      
 0.550
SCUBE1
Signal peptide, CUB domain and EGF like domain containing 1.
    
 
 0.548
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.