close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMTR1Cap methyltransferase 1. (834 aa)    
Predicted Functional Partners:
CCDC115
Coiled-coil domain containing 115.
      
 0.775
WDR7
WD repeat domain 7.
      
 0.727
RNF151
Ring finger protein 151.
      
 0.724
SUPT7L
STAGA complex 65 subunit gamma isoform b.
   
  
 0.709
SMDT1
Single-pass membrane protein with aspartate rich tail 1.
      
 0.693
SYDE2
Synapse defective Rho GTPase homolog 2.
      
 0.688
PCGF6
Polycomb group RING finger protein 6 isoform a.
      
 0.687
SLC35A1
Solute carrier family 35 member A1.
   
  
 0.671
RBM18
Putative RNA-binding protein 18 isoform X1.
      
 0.648
MED23
Mediator complex subunit 23.
  
   
 0.645
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.