STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NFYANuclear transcription factor Y subunit alpha. (346 aa)    
Predicted Functional Partners:
NFYC
Nuclear transcription factor Y subunit gamma.
    
 0.999
NFYB
Nuclear transcription factor Y subunit beta isoform X1.
   
 0.999
TBP
Uncharacterized protein.
    
 0.941
TBPL1
TATA-box binding protein like 1.
    
 0.921
SPDYC
Speedy protein C isoform X2.
    
 
 0.775
CHRAC1
Chromatin accessibility complex subunit 1.
    
 
 0.775
EP300
E1A binding protein p300.
    
 
 0.588
ZNF777
Zinc finger protein 777.
    
 
 0.580
TREML2
Triggering receptor expressed on myeloid cells like 2.
      
 0.553
SP1
Transcription factor Sp1 isoform a.
    
 
 0.540
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.