Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TREML1Triggering receptor expressed on myeloid cells like 1. (310 aa)    
Predicted Functional Partners:
TREML2
Triggering receptor expressed on myeloid cells like 2.
 
 
 
 0.892
TREM2
Ig-like domain-containing protein.
 
    
0.828
ACRBP
Acrosin-binding protein; May be involved in packaging and condensation of the acrosin zymogen in the acrosomal matrix via its association with proacrosin.
   
    0.679
GP9
Glycoprotein IX platelet.
   
  
 0.665
TREM1
Triggering receptor expressed on myeloid cells 1; Stimulates neutrophil and monocyte-mediated inflammatory responses. Triggers release of pro-inflammatory chemokines and cytokines, as well as increased surface expression of cell activation markers. Amplifier of inflammatory responses that are triggered by bacterial and fungal infections and is a crucial mediator of septic shock (By similarity).
   
  
 0.635
GP6
Ig-like domain-containing protein.
   
  
 0.574
FGL1
Fibrinogen like 1.
   
  
 0.536
CD300LB
CD300 molecule like family member b.
   
 
 0.508
CD300LF
Ig-like domain-containing protein.
   
 
 0.504
CMTM5
MARVEL domain-containing protein.
   
  
 0.502
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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