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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RRP36Novel protein similar to vertebrate chromosome 6 open reading frame 153 (C6orf153). (246 aa)    
Predicted Functional Partners:
UTP3
Sas10 domain-containing protein.
   
 0.941
KRR1
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 0.941
UTP25
UTP25 small subunit processor component.
   
 0.937
RRP9
Ribosomal RNA processing 9, U3 small nucleolar RNA binding protein.
   
 0.933
ABT1
Activator of basal transcription 1.
   
 
 0.927
UTP6
UTP6 small subunit processome component.
   
 0.908
UTP18
U3 small nucleolar RNA-associated protein 18 homolog.
   
 0.901
PRR35
Proline rich 35.
      
 0.875
CCDC36
Coiled-coil domain containing 36.
      
 0.874
RRP7A
Ribosomal RNA processing 7 homolog A.
   
 
 0.868
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.