Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
TM6SF1Transmembrane 6 superfamily member 1. (402 aa)    
Predicted Functional Partners:
BTBD1
BTB/POZ domain-containing protein 1 isoform 1.
   
  
 0.824
TMEM182
Transmembrane protein 182 isoform a.
      
 0.786
MORF4L1
Mortality factor 4-like protein 1 isoform 2.
      
 0.765
MXRA8
Matrix remodeling-associated protein 8 isoform 2.
      
 0.737
ACSBG1
Acyl-CoA synthetase bubblegum family member 1.
      
 0.722
CDH15
Cadherin-15 preproprotein; Cadherins are calcium-dependent cell adhesion proteins.
      
 0.597
STOML1
Stomatin like 1.
      
 0.595
ADAMTS12
ADAM metallopeptidase with thrombospondin type 1 motif 12.
      
 0.593
CTNND2
Catenin delta-2 isoform X1.
      
 0.553
APBA1
Amyloid beta precursor protein binding family A member 1.
      
 0.552
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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