STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PEAK1Pseudopodium enriched atypical kinase 1. (1748 aa)    
Predicted Functional Partners:
ATXN7L2
Ataxin-7-like protein 2 isoform 1.
      
 0.690
ATXN7L1
Ataxin 7 like 1.
      
 0.690
RCN2
Reticulocalbin 2.
      
 0.687
NKIRAS2
NF-kappa-B inhibitor-interacting Ras-like protein 2 isoform a.
      
 0.673
SCAPER
S phase cyclin A-associated protein in the endoplasmic reticulum isoform X1.
      
 0.656
TSPAN3
Tetraspanin.
      
 0.622
AFAP1
Uncharacterized protein.
      
 0.609
DOHH
Deoxyhypusine hydroxylase; Catalyzes the hydroxylation of the N(6)-(4-aminobutyl)-L- lysine intermediate to form hypusine, an essential post-translational modification only found in mature eIF-5A factor; Belongs to the deoxyhypusine hydroxylase family.
      
 0.595
IP6K1
Kinase; Belongs to the inositol phosphokinase (IPK) family.
      
 0.573
APRT
Pribosyltran domain-containing protein.
      
 0.570
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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