F1SHL4_PIG protein (Sus scrofa) - STRING interaction network

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Known Interactions

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Predicted Interactions

gene neighborhood

gene fusions

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textmining

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protein homology

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Score

F1SHL4_PIG

Uncharacterized protein. (247 aa)

Predicted Functional Partners:

ELAVL1

0.655

SRSF2

0.630

TNPO1

0.571

LOC110257929

0.556

ALYREF

0.524

ELAVL4

0.520

A0A286ZI50_PIG

0.517

TIAL1

0.515

SYNCRIP

0.514

TRA2A

0.514

Your Current Organism:

Sus scrofa

NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A286ZI50_PIG	ALYREF	ENSSSCP00000031134	ENSSSCP00000071154	RRM domain-containing protein.	Aly/REF export factor.	0.492
A0A286ZI50_PIG	F1SHL4_PIG	ENSSSCP00000031134	ENSSSCP00000002113	RRM domain-containing protein.	Uncharacterized protein.	0.517
A0A286ZI50_PIG	LOC110257929	ENSSSCP00000031134	ENSSSCP00000031025	RRM domain-containing protein.	RRM domain-containing protein.	0.515
A0A286ZI50_PIG	SRSF2	ENSSSCP00000031134	ENSSSCP00000040547	RRM domain-containing protein.	Serine/arginine-rich splicing factor 2; Necessary for the splicing of pre-mRNA. It is required for formation of the earliest ATP-dependent splicing complex and interacts with spliceosomal components bound to both the 5'- and 3'-splice sites during spliceosome assembly. It also is required for ATP-dependent interactions of both U1 and U2 snRNPs with pre-mRNA. Interacts with other spliceosomal components, via the RS domains, to form a bridge between the 5'- and 3'-splice site binding components, U1 snRNP and U2AF. Binds to purine-rich RNA sequences, either 5'-AGSAGAGTA-3' (S=C or G) or 5 [...]	0.433
A0A286ZI50_PIG	TIAL1	ENSSSCP00000031134	ENSSSCP00000033071	RRM domain-containing protein.	TIA1 cytotoxic granule associated RNA binding protein like 1.	0.550
A0A286ZI50_PIG	TRA2A	ENSSSCP00000031134	ENSSSCP00000070828	RRM domain-containing protein.	Transformer 2 alpha homolog.	0.694
ALYREF	A0A286ZI50_PIG	ENSSSCP00000071154	ENSSSCP00000031134	Aly/REF export factor.	RRM domain-containing protein.	0.492
ALYREF	ELAVL1	ENSSSCP00000071154	ENSSSCP00000014443	Aly/REF export factor.	ELAV-like protein; Belongs to the RRM elav family.	0.609
ALYREF	F1SHL4_PIG	ENSSSCP00000071154	ENSSSCP00000002113	Aly/REF export factor.	Uncharacterized protein.	0.524
ALYREF	LOC110257929	ENSSSCP00000071154	ENSSSCP00000031025	Aly/REF export factor.	RRM domain-containing protein.	0.536
ALYREF	SRSF2	ENSSSCP00000071154	ENSSSCP00000040547	Aly/REF export factor.	Serine/arginine-rich splicing factor 2; Necessary for the splicing of pre-mRNA. It is required for formation of the earliest ATP-dependent splicing complex and interacts with spliceosomal components bound to both the 5'- and 3'-splice sites during spliceosome assembly. It also is required for ATP-dependent interactions of both U1 and U2 snRNPs with pre-mRNA. Interacts with other spliceosomal components, via the RS domains, to form a bridge between the 5'- and 3'-splice site binding components, U1 snRNP and U2AF. Binds to purine-rich RNA sequences, either 5'-AGSAGAGTA-3' (S=C or G) or 5 [...]	0.712
ALYREF	SYNCRIP	ENSSSCP00000071154	ENSSSCP00000004639	Aly/REF export factor.	Synaptotagmin binding cytoplasmic RNA interacting protein.	0.484
ALYREF	TIAL1	ENSSSCP00000071154	ENSSSCP00000033071	Aly/REF export factor.	TIA1 cytotoxic granule associated RNA binding protein like 1.	0.602
ALYREF	TRA2A	ENSSSCP00000071154	ENSSSCP00000070828	Aly/REF export factor.	Transformer 2 alpha homolog.	0.436
ELAVL1	ALYREF	ENSSSCP00000014443	ENSSSCP00000071154	ELAV-like protein; Belongs to the RRM elav family.	Aly/REF export factor.	0.609
ELAVL1	F1SHL4_PIG	ENSSSCP00000014443	ENSSSCP00000002113	ELAV-like protein; Belongs to the RRM elav family.	Uncharacterized protein.	0.655
ELAVL1	SYNCRIP	ENSSSCP00000014443	ENSSSCP00000004639	ELAV-like protein; Belongs to the RRM elav family.	Synaptotagmin binding cytoplasmic RNA interacting protein.	0.582
ELAVL1	TIAL1	ENSSSCP00000014443	ENSSSCP00000033071	ELAV-like protein; Belongs to the RRM elav family.	TIA1 cytotoxic granule associated RNA binding protein like 1.	0.539
ELAVL1	TRA2A	ENSSSCP00000014443	ENSSSCP00000070828	ELAV-like protein; Belongs to the RRM elav family.	Transformer 2 alpha homolog.	0.647
ELAVL4	F1SHL4_PIG	ENSSSCP00000054711	ENSSSCP00000002113	ELAV-like protein; Belongs to the RRM elav family.	Uncharacterized protein.	0.520