STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAZ1ABromodomain adjacent to zinc finger domain 1A. (1557 aa)    
Predicted Functional Partners:
POLE3
Uncharacterized protein.
   
 0.976
CHRAC1
Chromatin accessibility complex subunit 1.
   
 0.948
SMARCA5
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5.
   
 0.935
SMARCA1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1.
    
 
 0.848
C12H17orf49
Uncharacterized protein.
     
 0.742
BAZ1B
Bromodomain adjacent to zinc finger domain 1B.
    
0.741
CECR2
CECR2 histone acetyl-lysine reader.
   
0.675
RSF1
PHD-type domain-containing protein.
   
 
0.648
BPTF
Bromodomain PHD finger transcription factor.
   
 
 0.610
CHD1L
Chromodomain helicase DNA binding protein 1 like.
    
 
 0.558
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.