STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
STXBP6Syntaxin binding protein 6. (237 aa)    
Predicted Functional Partners:
NYNRIN
NYN domain and retroviral integrase containing.
      
 0.889
TTC6
TPR_REGION domain-containing protein.
      
 0.869
REC114
Meiotic recombination protein REC114 isoform 1.
      
 0.845
RNF17
Ring finger protein 17.
   
  
 0.829
RNF144B
RBR-type E3 ubiquitin transferase.
      
 0.760
CBLN3
Precerebellin 3.
      
 0.731
EXOC4
Exocyst complex component 4 tv1.
   
 0.718
FAM83B
Family with sequence similarity 83 member B.
   
  
 0.697
EXOC8
Exocyst complex component 8.
    
 0.689
EXOC1
Exocyst complex component 1.
    
0.680
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.