STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPGRIP1RPGR interacting protein 1. (939 aa)    
Predicted Functional Partners:
NPHP4
Nephrocystin 4.
    
 
 0.969
RPGR
Uncharacterized protein.
    
 
 0.950
AIPL1
Aryl hydrocarbon receptor interacting protein like 1.
      
 0.821
WHRN
Whirlin.
   
  
 0.795
CNGB3
Cyclic nucleotide gated channel subunit beta 3.
   
  
 0.781
RD3
Retinal degeneration 3, GUCY2D regulator.
      
 0.774
RCC1
Regulator of chromosome condensation isoform b.
    
 
 0.731
PRCD
Photoreceptor disc component.
      
 0.721
CEP290
Centrosomal protein 290.
    
 
 0.677
GPRIN1
G protein regulated inducer of neurite outgrowth 1.
      
 0.665
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.