STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FOXL1Forkhead box protein L1. (338 aa)    
Predicted Functional Partners:
DPYSL4
Dihydropyrimidinase like 4.
      
 0.681
TCERG1L
Transcription elongation regulator 1 like.
      
 0.667
SGSM1
Small G protein signaling modulator 1.
      
 0.659
INPP5A
Inositol polyphosphate-5-phosphatase A.
      
 0.608
POLR1D
RNA polymerase I and III subunit D.
   
  
 0.593
TMEM200A
Transmembrane protein 200A isoform X1.
      
 0.575
WNT2B
Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.
      
 0.571
ZBTB39
Zinc finger and BTB domain containing 39.
    
 
 0.559
TBP
Uncharacterized protein.
   
 
 0.547
UMODL1
Uromodulin like 1.
    
 
 0.542
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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