STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TAF1CTATA-box binding protein associated factor, RNA polymerase I subunit C. (908 aa)    
Predicted Functional Partners:
TAF1B
TATA box-binding protein-associated factor RNA polymerase I subunit B isoform a.
    
 0.962
TAF1D
TATA-box binding protein associated factor, RNA polymerase I subunit D.
    
 0.953
RRN3
RNA polymerase I-specific transcription initiation factor RRN3 isoform 1.
    
 0.915
TAF1A
TATA box-binding protein-associated factor RNA polymerase I subunit A isoform 1.
     
  0.800
TWISTNB
SHS2_Rpb7-N domain-containing protein.
     
 0.739
POLR1A
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.732
POLR1B
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.728
UBTF
Upstream binding transcription factor.
    
 0.702
AHCTF1
AT-hook containing transcription factor 1.
      
 0.654
SPC24
SPC24 component of NDC80 kinetochore complex.
      
 0.647
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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