STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LSRLipolysis stimulated lipoprotein receptor. (598 aa)    
Predicted Functional Partners:
HCRTR2
Orexin receptor type 2; Nonselective, high-affinity receptor for both orexin-A and orexin-B neuropeptides. Triggers an increase in cytoplasmic Ca(2+) levels in response to orexin-A binding.
    
 
 0.684
LOC100621820
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
    
 
 0.632
LOC100739735
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
    
 
 0.632
SYMPK
Symplekin.
      
 0.607
MARVELD3
MARVEL domain-containing protein.
      
 0.589
TFG
Trafficking from ER to golgi regulator.
    
 
 0.579
RAB3B
RAB3B, member RAS oncogene family.
      
 0.547
NTS
Neurotensin/neuromedin N preproprotein.
      
 0.515
OCLN
Occludin; May play a role in the formation and regulation of the tight junction (TJ) paracellular permeability barrier. Belongs to the ELL/occludin family.
   
  
 0.514
RAB13
Uncharacterized protein.
    
 
 0.508
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.