STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CATSPERGCation channel sperm associated auxiliary subunit gamma. (1160 aa)    
Predicted Functional Partners:
CATSPERB
Cation channel sperm associated auxiliary subunit beta.
  
 
 0.961
CATSPERD
Cation channel sperm associated auxiliary subunit delta.
   
 0.949
CATSPER1
Ion_trans domain-containing protein.
    
 0.936
ANKZF1
Ankyrin repeat and zinc finger peptidyl tRNA hydrolase 1.
      
 0.868
CATSPER3
Ion_trans domain-containing protein.
    
 0.867
CATSPER2
Cation channel sperm associated 2.
    
 0.844
CATSPERZ
Uncharacterized protein.
    
 0.805
MORC1
MORC family CW-type zinc finger 1.
      
 0.773
CATSPER4
Cation channel sperm associated 4.
    
 0.768
EFCAB9
Uncharacterized protein.
  
 
 0.766
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.