STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM145Transmembrane protein 145 isoform X1. (562 aa)    
Predicted Functional Partners:
TRAPPC11
Trafficking protein particle complex 11.
   
  
 0.911
CDKN2AIP
CDKN2A-interacting protein isoform X1.
      
 0.898
PELO
Protein pelota homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs.
      
 0.859
B9D2
B9 domain-containing protein 2 isoform X1.
      
 0.849
STOX2
Storkhead box 2.
      
 0.849
WWC2
WW and C2 domain containing 2.
   
  
 0.781
ING2
Inhibitor of growth protein.
   
  
 0.673
PAFAH1B3
Platelet activating factor acetylhydrolase 1b catalytic subunit 3.
      
 0.610
PGBD5
PiggyBac transposable element-derived protein 5.
   
  
 0.601
SLC25A28
Solute carrier family 25 member 28; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.572
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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