STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NPAS1Neuronal PAS domain protein 1. (594 aa)    
Predicted Functional Partners:
ARNT
Aryl hydrocarbon receptor nuclear translocator isoform X3.
    
 
0.978
ARNT2
Aryl hydrocarbon receptor nuclear translocator 2.
    
 
0.676
VHL
Von Hippel-Lindau disease tumor suppressor isoform 1.
    
 
 0.620
LHX6
LIM homeobox 6.
    
 
 0.577
GBX1
Gastrulation brain homeobox 1.
      
 0.575
SST
Somatostatin-14; [Somatostatin-14]: Inhibits the secretion of pituitary hormones, including that of growth hormone/somatotropin (GH1), PRL, ACTH, luteinizing hormone (LH) and TSH. Also impairs ghrelin- and GnRH- stimulated secretion of GH1 and LH; the inhibition of ghrelin- stimulated secretion of GH1 can be further increased by neuronostatin.
      
 0.571
EGLN3
Egl-9 family hypoxia inducible factor 3.
    
 
 0.555
DCHS1
Dachsous cadherin-related 1.
      
 0.550
SPIDR
DNA repair-scaffolding protein isoform 1.
      
 0.547
NIM1K
NIM1 serine/threonine protein kinase; Belongs to the protein kinase superfamily.
   
  
 0.542
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.