Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BCL2L12BCL2 like 12. (255 aa)    
Predicted Functional Partners:
KSR2
Kinase suppressor of ras 2.
    
 
 0.827
RIT1
Ras like without CAAX 1.
      
 0.777
LRRIQ3
Leucine rich repeats and IQ motif containing 3.
      
 0.703
TMEM260
Transmembrane protein 260 isoform X1.
      
 0.701
CTU1
Cytoplasmic tRNA 2-thiolation protein 1; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Directly binds tRNAs and probably acts by catalyzing adenylation of tRNAs, an intermediate required for 2-thiolation. It is unclear whether it acts as a sulfurtransferase that transfers sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position; Belongs to the TtcA family. CTU1/NCS6/ATPBD3 subfamily.
      
 0.675
MFAP3
Microfibril-associated glycoprotein 3 isoform 1.
      
 0.673
SYT3
Synaptotagmin-3 isoform X1.
      
 0.640
ZNF215
Uncharacterized protein.
      
 0.640
INTS4
Uncharacterized protein.
      
 0.640
ABHD13
Abhydrolase domain containing 13.
      
 0.597
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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