Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
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[Homology]
Score
TTYH1Protein tweety homolog; Probable chloride channel; Belongs to the tweety family. (485 aa)    
Predicted Functional Partners:
CDC42EP5
CDC42 effector protein 5.
      
 0.910
LENG8
Leukocyte receptor cluster member 8 isoform X1.
      
 0.909
LOC100515837
Leukocyte associated immunoglobulin like receptor 1.
      
 0.784
VSTM1
V-set and transmembrane domain containing 1.
      
 0.765
A0A287AEP5_PIG
Uncharacterized protein.
      
 0.667
LRRC8C
Leucine rich repeat containing 8 VRAC subunit C.
      
 0.655
GP6
Ig-like domain-containing protein.
      
 0.591
ALCAM
Activated leukocyte cell adhesion molecule.
      
 0.586
UNK
Unk zinc finger.
      
 0.565
SLC24A4
Solute carrier family 24 member 4; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.
   
  
 0.523
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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