Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZNF582Zinc finger protein 582 isoform 1. (517 aa)    
Predicted Functional Partners:
TRIM28
Tripartite motif containing 28.
   
 0.551
FAM110D
Family with sequence similarity 110 member D.
      
 0.468
ZNF483
Zinc finger protein 483 isoform X1.
    
 
 0.452
PPP4R4
Protein phosphatase 4 regulatory subunit 4.
    
 
 0.424
NCAPG2
Non-SMC condensin II complex subunit G2.
      
 0.424
PGPEP1L
Pyroglutamyl-peptidase I like.
    
 
 0.418
A0A287BTJ5_PIG
Uncharacterized protein.
      
 0.411
C6orf52
Chromosome 6 open reading frame 52.
    
 
 0.402
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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