STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC45A1Solute carrier family 45 member 1. (797 aa)    
Predicted Functional Partners:
PSD2
Pleckstrin and Sec7 domain containing 2.
   
  
 0.761
ANAPC1
Anaphase promoting complex subunit 1.
      
 0.718
SLC16A8
Solute carrier family 16 member 8.
   
  
 0.705
OIP5
Opa interacting protein 5.
      
 0.676
SMARCC1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1.
   
 
 0.652
A0A5G2R7X9_PIG
PhoLip_ATPase_N domain-containing protein.
   
  
 0.626
DHX30
DExH-box helicase 30.
   
  
 0.588
MAP4
Microtubule-associated protein.
   
  
 0.577
RERE
Uncharacterized protein.
      
 0.535
SLC25A33
Solute carrier family 25 member 33; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
  
 0.523
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.