STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBP7Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. (485 aa)    
Predicted Functional Partners:
RTL4
Retrotransposon Gag like 4.
      
 0.763
SLCO6A1
Solute carrier organic anion transporter family member 6A1.
   
  
 0.760
UBE4B
Ubiquitination factor E4B.
 
    
 0.701
RNF150
Ring finger protein 150.
   
  
 0.614
RBP4
Retinol-binding protein 4; Retinol-binding protein that mediates retinol transport in blood plasma. Delivers retinol from the liver stores to the peripheral tissues. Transfers the bound all-trans retinol to STRA6, that then facilitates retinol transport across the cell membrane. Belongs to the calycin superfamily. Lipocalin family.
   
  
 0.579
LRRK1
Leucine rich repeat kinase 1.
      
 0.557
LHFPL1
LHFPL tetraspan subfamily member 1 protein isoform X1.
   
  
 0.554
ADAD1
Adenosine deaminase domain containing 1.
   
  
 0.516
PLXNA2
Plexin A2.
      
 0.483
SLCO4C1
Solute carrier organic anion transporter family member.
   
  
 0.468
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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