Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
HMGN2Non-histone chromosomal protein HMG-17. (139 aa)    
Predicted Functional Partners:
HMGN3
High mobility group nucleosomal binding domain 3.
   
 
 0.940
MRPL12
Mitochondrial ribosomal protein L12.
  
 
 0.901
FAU
Ubiquitin-like protein FUBI.
   
 
 0.851
A0A287BBK4_PIG
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 
 0.851
A0A5G2QQZ4_PIG
Ubiquitin-like domain-containing protein.
   
 
 0.851
F1SBB8_PIG
Uncharacterized protein.
   
 
 0.850
HMGN4
Non-histone chromosomal protein HMG-17; Binds to the inner side of the nucleosomal DNA thus altering the interaction between the DNA and the histone octamer. May be involved in the process which maintains transcribable genes in a unique chromatin conformation (By similarity).
   
   0.836
RPL17-C18orf32
60S ribosomal protein L17 isoform a; Belongs to the universal ribosomal protein uL22 family.
  
 
 0.833
RPL34
60S ribosomal protein L34; Component of the large ribosomal subunit.
   
 0.803
RPL5
60S ribosomal protein L5; Component of the ribosome, a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell. The small ribosomal subunit (SSU) binds messenger RNAs (mRNAs) and translates the encoded message by selecting cognate aminoacyl-transfer RNA (tRNA) molecules. The large subunit (LSU) contains the ribosomal catalytic site termed the peptidyl transferase center (PTC), which catalyzes the formation of peptide bonds, thereby polymerizing the amino acids delivered by tRNAs into a polypeptide chain. The nascent polypeptides leave the ribosome through [...]
  
 
 0.792
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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