STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSMD2Uncharacterized protein. (1106 aa)    
Predicted Functional Partners:
KCTD15
Potassium channel tetramerization domain containing 15.
      
 0.639
ZBTB39
Zinc finger and BTB domain containing 39.
    
 
 0.612
FSTL5
Follistatin like 5.
   
  
 0.604
CLPTM1
CLPTM1 regulator of GABA type A receptor forward trafficking.
    
 
 0.601
TXLNA
Taxilin alpha.
      
 0.598
GPR137C
G protein-coupled receptor 137C.
      
 0.556
ZSCAN20
Zinc finger and SCAN domain-containing protein 20.
    
 
 0.555
TCP11L2
T-complex protein 11-like protein 2 isoform X1.
      
 0.553
ARHGAP23
Rho GTPase activating protein 23.
      
 0.553
CLSTN3
Calsyntenin 3.
      
 0.550
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.