STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CZIBCXXC motif containing zinc binding protein. (160 aa)    
Predicted Functional Partners:
ARHGEF16
Rho guanine nucleotide exchange factor 16.
      
 0.669
PHYHD1
Phytanoyl-CoA dioxygenase domain containing 1.
      
 0.661
FOXRED2
FAD-dependent oxidoreductase domain-containing protein 2.
      
 0.611
DCPS
m7GpppX diphosphatase; Decapping scavenger enzyme that catalyzes the cleavage of a residual cap structure following the degradation of mRNAs by the 3'->5' exosome-mediated mRNA decay pathway. Hydrolyzes cap analog structures like 7-methylguanosine nucleoside triphosphate (m7GpppG) with up to 10 nucleotide substrates (small capped oligoribonucleotides) and specifically releases 5'-phosphorylated RNA fragments and 7- methylguanosine monophosphate (m7GMP). Cleaves cap analog structures like tri-methyl guanosine nucleoside triphosphate (m3(2,2,7)GpppG) with very poor efficiency. Does not h [...]
      
 0.609
NUDT6
Nudix hydrolase 6; Belongs to the Nudix hydrolase family.
      
 0.597
RCCD1
RCC1 domain containing 1.
      
 0.571
CTTNBP2
Cortactin binding protein 2.
      
 0.557
NOCT
Nocturnin.
      
 0.557
TPMT
Thiopurine S-methyltransferase.
      
 0.556
RASSF6
Ras association domain-containing protein 6 isoform a.
      
 0.550
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.