STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OLIG3Oligodendrocyte transcription factor 3. (272 aa)    
Predicted Functional Partners:
TLX3
T cell leukemia homeobox 3.
      
 0.801
ZFP37
Zinc finger protein 37 homolog isoform 1.
    
 
 0.672
DBX2
Developing brain homeobox 2.
   
  
 0.589
MYT1L
Myelin transcription factor 1 like.
   
  
 0.578
DBX1
Developing brain homeobox 1.
   
  
 0.546
GDF7
Growth differentiation factor 7.
      
 0.538
ATOH1
Atonal bHLH transcription factor 1.
   
 
0.534
LMX1A
LIM homeobox transcription factor 1 alpha.
   
  
 0.529
LHX5
LIM/homeobox protein Lhx5.
   
  
 0.521
PHOX2A
Paired mesoderm homeobox protein 2A.
   
  
 0.517
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.