STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMPDL3AAcid sphingomyelinase-like phosphodiesterase. (452 aa)    
Predicted Functional Partners:
GSTT4
Glutathione S-transferase theta 4; Belongs to the GST superfamily.
      
 0.857
BTBD10
BTB/POZ domain-containing protein 10 isoform X2.
      
 0.851
TTC23
Tetratricopeptide repeat domain 23.
      
 0.761
SQOR
Sulfide:quinone oxidoreductase, mitochondrial.
      
 0.754
ACP7
Purple acid phosphatase.
   
  
 0.691
ACER3
Alkaline ceramidase; Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid.
      
 0.665
CEP104
Centrosomal protein of 104 kDa isoform X1.
      
 0.624
CERS6
Ceramide synthase 6.
      
 0.612
SPHKAP
SPHK1 interactor, AKAP domain containing.
      
 0.610
TTC36
Tetratricopeptide repeat domain 36.
      
 0.610
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.