STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC68Coiled-coil domain-containing protein 68 isoform X1. (328 aa)    
Predicted Functional Partners:
CCDC120
Coiled-coil domain containing 120.
     
 0.967
NIN
Ninein.
    
 0.960
CEP170
Centrosomal protein 170.
    
 0.946
CEP128
Centrosomal protein 128.
     
 0.937
CCDC6
Coiled-coil domain containing 6.
      
 0.869
STARD6
StAR-related lipid transfer protein 6 isoform X2.
      
 0.796
CPLX4
Complexin 4.
      
 0.742
C2CD3
C2 domain containing 3 centriole elongation regulator.
      
 0.680
MAPK4
Mitogen-activated protein kinase 4 isoform X1.
      
 0.648
LRRC45
Leucine rich repeat containing 45.
      
 0.646
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.